PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010932620.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 361aa    MW: 40805.5 Da    PI: 5.2968
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010932620.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.51.6e-33111501128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sg 81 
                     lp+G++F+P+d+el+++ L+k  +g+      ++  e+i++v+    i++++P++Lp  vk++ +  +fF+++ k+y+tg+rk+r+++     + 
  XP_010932620.1  11 LPRGVKFDPSDQELLWHLLAKVGQGDAkphpfIN--EFIPTVEegdgICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGTRKRRKINsddlgDV 102
                     799************7777766665557754422..33444423335**********.677888899******************8655555588 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+k+v+  +g++ g+kk++v+y  + + +k+ekt+Wvmh+y+l
  XP_010932620.1 103 RWHKTGKTKPVIM-DGKHQGCKKIMVLYmsTIKGEKPEKTNWVMHQYHL 150
                     9************.9999**********6633667777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.81E-393169IPR003441NAC domain
PROSITE profilePS5100531.37111169IPR003441NAC domain
PfamPF023659.2E-1512150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MQHVVQEWPG LPRGVKFDPS DQELLWHLLA KVGQGDAKPH PFINEFIPTV EEGDGICYTH  60
PQKLPGVKQD GSVSHFFHRT FKAYNTGTRK RRKINSDDLG DVRWHKTGKT KPVIMDGKHQ  120
GCKKIMVLYM STIKGEKPEK TNWVMHQYHL GTGEDEKDGE YVVSKIFYQQ QSKPGDKNGQ  180
DLTLEIVEAV VAEVDPVANP KSVSSECHVG KQDPAHSPEQ TSDQVKMYHE NRVEEHNAPL  240
ECEKFDDQDN HPTGDLKWWE GESQFLLDSQ QLAEGIAICD EFLLSQSSCG GDEAKKSRPR  300
LSDYAHMGAE DLKKDLEACQ NLSNYDRSNI ELDPPQDFRL SQLEFGSQDS FLAWGGSKLA  360
D
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010932620.10.0PREDICTED: NAC domain-containing protein 8 isoform X2
SwissprotQ6NQK21e-128NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM0SCK00.0M0SCK0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P07330_0010.0(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-123NAC family protein